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  5. Solyc08g014030.1.1

Solyc08g014030.1.1 (SHR, SGR7, Solyc08g014030)


Aliases : SHR, SGR7, Solyc08g014030

Description : transcription factor (GRAS). SHR gravity signalling transcription factor


Gene families : OG0003562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g014030.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00182770 SHR, SGR7,... External stimuli response.gravity.sensing and... 0.03 OrthoFinder output from all 47 species
AT4G37650 SHR, SGR7 GRAS family transcription factor 0.03 OrthoFinder output from all 47 species
Adi_g067554 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g082025 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.02 OrthoFinder output from all 47 species
Aev_g06030 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.02 OrthoFinder output from all 47 species
Aob_g17904 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.05 OrthoFinder output from all 47 species
Aop_g04274 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Cba_g08230 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Dac_g14496 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Dcu_g02895 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01004104001 SHR, SGR7 External stimuli response.gravity.sensing and... 0.03 OrthoFinder output from all 47 species
LOC_Os03g31880.1 SHR, SGR7, LOC_Os03g31880 transcription factor (GRAS). SHR gravity signalling... 0.05 OrthoFinder output from all 47 species
LOC_Os07g39820.1 SHR, SGR7, LOC_Os07g39820 transcription factor (GRAS). SHR gravity signalling... 0.05 OrthoFinder output from all 47 species
MA_99004g0010 SHR, SGR7 transcription factor (GRAS) 0.05 OrthoFinder output from all 47 species
Msp_g25441 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Solyc02g092370.1.1 SHR, SGR7, Solyc02g092370 transcription factor (GRAS). SHR gravity signalling... 0.11 OrthoFinder output from all 47 species
Tin_g21974 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Zm00001e002085_P001 SHR, SGR7, Zm00001e002085 transcription factor (GRAS). SHR gravity signalling... 0.03 OrthoFinder output from all 47 species
Zm00001e010666_P001 SHR, SGR7, Zm00001e010666 transcription factor (GRAS). SHR gravity signalling... 0.02 OrthoFinder output from all 47 species
Zm00001e035411_P001 SHR, SGR7, Zm00001e035411 transcription factor (GRAS). SHR gravity signalling... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 32 408
No external refs found!