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  5. Solyc08g016720.1.1

Solyc08g016720.1.1 (NCED3, SIS7, STO1,...)


Aliases : NCED3, SIS7, STO1, ATNCED3, Solyc08g016720

Description : neoxanthin cleavage protein


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g016720.1.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.08 OrthoFinder output from all 47 species
Adi_g126851 ATCCD1, CCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04409 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Als_g18482 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Als_g29909 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Cba_g26756 NCED3, SIS7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12313 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dac_g13027 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Dcu_g03912 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dcu_g16938 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dde_g17123 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Gb_04986 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.06 OrthoFinder output from all 47 species
LOC_Os07g05940.1 ATNCED9, NCED9,... neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
Mp3g20700.1 ATNCED5, NCED5 neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
Nbi_g14297 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Nbi_g30548 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Pir_g61521 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003802 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Smo80651 NCED3, SIS7,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Solyc07g056570.1.1 NCED3, SIS7,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
Spa_g26569 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Zm00001e012402_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
Zm00001e017976_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 110 572
No external refs found!