Solyc08g061270.1.1 (Solyc08g061270)


Aliases : Solyc08g061270

Description : no hits & (original description: none)


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g061270.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00017060 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00024p00245950 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G54095 No alias Protein of unknown function (DUF1677) 0.05 OrthoFinder output from all 47 species
AT5G25840 No alias Protein of unknown function (DUF1677) 0.05 OrthoFinder output from all 47 species
Aev_g01868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04896.t1 Aspi01Gene04896 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25095.t1 Aspi01Gene25095 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G070500.1 Ceric.25G070500 not classified & original description: pacid=50594676... 0.04 OrthoFinder output from all 47 species
Ceric.33G033900.1 Ceric.33G033900 not classified & original description: pacid=50607113... 0.04 OrthoFinder output from all 47 species
GSVIVT01017007001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g10260.1 LOC_Os01g10260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g10310.1 LOC_Os01g10310 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g54170.1 LOC_Os01g54170 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g46300.1 LOC_Os03g46300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g09900.1 LOC_Os06g09900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_23866g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_6921525g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_764231g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g06082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g054130.1.1 Solyc06g054130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g082190.1.1 Solyc09g082190 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g02634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03777 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e030672_P001 Zm00001e030672 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 5 92
No external refs found!