1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g066690.4.1

Solyc08g066690.4.1 (Solyc08g066690)


Aliases : Solyc08g066690

Description : Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana (sp|q9ffn2|glyt3_arath : 326.0)


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g066690.4.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00264420 evm_27.TU.AmTr_v1... Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00046p00183980 evm_27.TU.AmTr_v1... Cell... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00069820 evm_27.TU.AmTr_v1... Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G03795 No alias Exostosin family protein 0.03 OrthoFinder output from all 47 species
AT5G11610 No alias Exostosin family protein 0.04 OrthoFinder output from all 47 species
AT5G20260 No alias Exostosin family protein 0.04 OrthoFinder output from all 47 species
AT5G25820 No alias Exostosin family protein 0.03 OrthoFinder output from all 47 species
Adi_g059907 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05140 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28837.t1 Aspi01Gene28837 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54598.t1 Aspi01Gene54598 xylogalacturonan xylosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09755 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15246 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g42533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001143001 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01006274001 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01030133001 No alias Cell... 0.03 OrthoFinder output from all 47 species
Gb_02335 No alias xylogalacturonan xylosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os02g39960.1 LOC_Os02g39960 xylogalacturonan xylosyltransferase 0.01 OrthoFinder output from all 47 species
Len_g09335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432435g0010 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_125709g0010 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g12090.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g12100.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g17370.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g13740.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g11062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g045120.2.1 Solyc07g045120 xylogalacturonan xylosyltransferase 0.07 OrthoFinder output from all 47 species
Solyc08g066670.3.1 Solyc08g066670 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g085730.3.1 Solyc10g085730 xylogalacturonan xylosyltransferase 0.04 OrthoFinder output from all 47 species
Tin_g45216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036361_P001 Zm00001e036361 xylogalacturonan xylosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 311 588
No external refs found!