Aliases : TCX2, ATTCX2, Solyc08g067150
Description : CPP1-like transcription factor
Gene families : OG0001700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001700_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc08g067150.4.1 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00042p00022530 | TSO1, ATTSO1,... | RNA biosynthesis.transcriptional activation.CPP1-like... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g081377 | SOL1 | TCX/CPP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g026007 | SOL1 | TCX/CPP-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0114.g046064 | SOL1 | TCX/CPP-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G002900.1 | TCX2, ATTCX2,... | TCX/CPP-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.37G017200.1 | TSO1, ATTSO1,... | TCX/CPP-type transcription factor & original... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000037.21 | No alias | RNA biosynthesis.transcriptional activation.CPP1-like... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g550250 | TCX2, ATTCX2 | RNA biosynthesis.transcriptional activation.CPP1-like... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g21027 | SOL1 | TCX/CPP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g13047 | SOL1 | TCX/CPP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01035818001 | TCX2, ATTCX2 | RNA biosynthesis.transcriptional activation.CPP1-like... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_38828 | TCX2, ATTCX2 | CPP1-like transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g41230.2 | TCX2, ATTCX2,... | CPP1-like transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Len_g02905 | TCX2, ATTCX2 | TCX/CPP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_15033g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_33846g0010 | TCX2, ATTCX2 | CPP1-like transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Mp2g11520.1 | TCX2, ATTCX2 | CPP1-like transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e003195_P002 | TCX2, ATTCX2,... | CPP1-like transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018076_P001 | TCX2, ATTCX2,... | CPP1-like transcription factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | HCCA |
| CC | GO:0000808 | origin recognition complex | IEP | HCCA |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | HCCA |
| CC | GO:0005680 | anaphase-promoting complex | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| No external refs found! |
