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  5. Solyc08g067550.1.1

Solyc08g067550.1.1 (Solyc08g067550)


Aliases : Solyc08g067550

Description : no hits & (original description: none)


Gene families : OG0000407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000407_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g067550.1.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00024840 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00066810 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Malus domestica 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00067510 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Malus domestica 0.04 OrthoFinder output from all 47 species
AMTR_s00077p00070120 LTP4,... Non-specific lipid-transfer protein OS=Helianthus annuus 0.11 OrthoFinder output from all 47 species
AMTR_s00162p00083730 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT2G18370 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G38530 LP2, cdf3, LTP2 lipid transfer protein 2 0.05 OrthoFinder output from all 47 species
AT2G38540 LTP1, ATLTP1, LP1 lipid transfer protein 1 0.05 OrthoFinder output from all 47 species
AT5G59330 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Aev_g47330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08094.t1 LTP4, Aspi01Gene08094 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08095.t1 Aspi01Gene08095 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08097.t1 LTP12, Aspi01Gene08097 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28784.t1 LTP4, Aspi01Gene28784 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28787.t1 Aspi01Gene28787 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G024300.1 Ceric.02G024300 not classified & original description: pacid=50585057... 0.03 OrthoFinder output from all 47 species
Ceric.11G012100.1 Ceric.11G012100 not classified & original description: pacid=50596478... 0.03 OrthoFinder output from all 47 species
Ceric.11G012200.1 LTP4, Ceric.11G012200 not classified & original description: pacid=50595350... 0.04 OrthoFinder output from all 47 species
Ceric.13G068200.1 Ceric.13G068200 not classified & original description: pacid=50636227... 0.04 OrthoFinder output from all 47 species
Ceric.1Z037200.1 Ceric.1Z037200 not classified & original description: pacid=50567729... 0.04 OrthoFinder output from all 47 species
Ceric.26G064000.1 Ceric.26G064000 not classified & original description: pacid=50599390... 0.03 OrthoFinder output from all 47 species
Ceric.30G041400.1 LTP1, ATLTP1,... not classified & original description: pacid=50608945... 0.04 OrthoFinder output from all 47 species
Ceric.30G041500.1 LTP1, ATLTP1,... not classified & original description: pacid=50608788... 0.03 OrthoFinder output from all 47 species
Ceric.30G047000.1 Ceric.30G047000 not classified & original description: pacid=50609459... 0.03 OrthoFinder output from all 47 species
Dac_g25121 LTP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48712 LTP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15981 LTP1, ATLTP1, LP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006001001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01021772001 No alias Non-specific lipid-transfer protein C,... 0.03 OrthoFinder output from all 47 species
GSVIVT01024563001 LTP5 Non-specific lipid-transfer protein 1 OS=Morus nigra 0.08 OrthoFinder output from all 47 species
Gb_00826 No alias Non-specific lipid-transfer protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_02341 LTP3 Non-specific lipid-transfer protein OS=Pinus taeda... 0.06 OrthoFinder output from all 47 species
Gb_02342 LTP3 Non-specific lipid-transfer protein OS=Pinus taeda... 0.04 OrthoFinder output from all 47 species
Gb_19511 LTP1, ATLTP1, LP1 Non-specific lipid-transfer protein 5 OS=Lens culinaris... 0.04 OrthoFinder output from all 47 species
Gb_19512 LTP1, ATLTP1, LP1 Non-specific lipid-transfer protein 5 OS=Lens culinaris... 0.04 OrthoFinder output from all 47 species
Gb_20253 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_20254 No alias Non-specific lipid-transfer protein OS=Gerbera hybrida... 0.03 OrthoFinder output from all 47 species
Gb_20255 No alias Non-specific lipid-transfer protein OS=Gerbera hybrida... 0.04 OrthoFinder output from all 47 species
Gb_23000 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_25561 LTP3 Non-specific lipid-transfer protein 4 (Fragment) OS=Lens... 0.04 OrthoFinder output from all 47 species
Gb_41630 No alias Non-specific lipid-transfer protein 4.1 OS=Hordeum... 0.05 OrthoFinder output from all 47 species
LOC_Os03g59380.1 LOC_Os03g59380 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g06340.1 LOC_Os06g06340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34840.1 LOC_Os06g34840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g02350.1 LOC_Os11g02350 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os11g02369.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2A OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os11g24070.1 LOC_Os11g24070 Non-specific lipid-transfer protein 1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os12g02300.1 LOC_Os12g02300 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g02310.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2B OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g02330.2 LTP3, LOC_Os12g02330 Non-specific lipid-transfer protein 1 OS=Morus nigra... 0.05 OrthoFinder output from all 47 species
LOC_Os12g02340.1 LTP3, LOC_Os12g02340 Probable non-specific lipid-transfer protein 3... 0.03 OrthoFinder output from all 47 species
Len_g04459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434303g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.04 OrthoFinder output from all 47 species
MA_128304g0010 No alias Non-specific lipid-transfer protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_209545g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.03 OrthoFinder output from all 47 species
MA_307546g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_422961g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_50251g0010 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
MA_58978g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.04 OrthoFinder output from all 47 species
MA_6565643g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.04 OrthoFinder output from all 47 species
MA_6905336g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7418293g0010 LTP6 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_903132g0010 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
MA_9589878g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g27657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019322 No alias not classified & original description: CDS=195-662 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019327 No alias not classified & original description: CDS=54-425 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023749 LTP1, ATLTP1, LP1 not classified & original description: CDS=116-469 0.03 OrthoFinder output from all 47 species
Sam_g33394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g081590.4.1 LTP6, Solyc01g081590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g005780.1.1 Solyc06g005780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g005795.2.1 Solyc06g005795 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g067500.1.1 Solyc08g067500 no description available(sp|a0a2j6kl39|nltp_lacsa : 85.1) 0.03 OrthoFinder output from all 47 species
Solyc08g067510.1.1 LTP3, Solyc08g067510 no description available(sp|a0a2j6kl39|nltp_lacsa : 101.0) 0.07 OrthoFinder output from all 47 species
Solyc08g067540.1.1 Solyc08g067540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g018010.3.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 1 OS=Nicotiana... 0.05 OrthoFinder output from all 47 species
Solyc09g150148.1.1 Solyc09g150148 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc10g012120.1.1 Solyc10g012120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g039197.2.1 Solyc10g039197 Non-specific lipid-transfer protein B OS=Ricinus... 0.03 OrthoFinder output from all 47 species
Solyc10g075070.3.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 1 OS=Solanum... 0.08 OrthoFinder output from all 47 species
Solyc10g075090.3.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Solyc10g075100.2.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Solyc10g075103.1.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Solyc10g075107.1.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Solyc10g075110.2.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 1 OS=Solanum... 0.05 OrthoFinder output from all 47 species
Solyc10g075118.1.1 Solyc10g075118 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.07 OrthoFinder output from all 47 species
Solyc10g075150.2.1 Solyc10g075150 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.06 OrthoFinder output from all 47 species
Solyc10g076200.3.1 Solyc10g076200 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.07 OrthoFinder output from all 47 species
Tin_g40525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019437_P001 Zm00001e019437 Non-specific lipid-transfer protein 10 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e026064_P001 Zm00001e026064 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037122_P001 Zm00001e037122 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e039316_P001 LTP3, Zm00001e039316 Non-specific lipid-transfer protein OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e040319_P005 Zm00001e040319 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 39 124
No external refs found!