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  5. Solyc08g069050.3.1

Solyc08g069050.3.1 (UBP19, Solyc08g069050)


Aliases : UBP19, Solyc08g069050

Description : deubiquitinase (UBP15-21)


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g069050.3.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT3G14400 UBP25 ubiquitin-specific protease 25 0.04 OrthoFinder output from all 47 species
AT4G24560 UBP16 ubiquitin-specific protease 16 0.04 OrthoFinder output from all 47 species
Adi_g077157 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098237 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27664 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02390 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00561.t1 UBP25, Aspi01Gene00561 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G085100.1 UBP23, Ceric.03G085100 deubiquitinase *(UBP23) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.15G035800.1 UBP19, Ceric.15G035800 deubiquitinase *(UBP15-21) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.22G015900.1 UBP25, Ceric.22G015900 not classified & original description: pacid=50613832... 0.03 OrthoFinder output from all 47 species
Cre06.g248950 UBP25 Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Cre16.g648600 UBP19 No description available 0.02 OrthoFinder output from all 47 species
Dcu_g09670 UBP25 deubiquitinase *(UBP25) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07912 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001911001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01001912001 UBP23 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01033166001 UBP18 Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
Gb_05817 UBP18 deubiquitinase (UBP15-21) 0.04 OrthoFinder output from all 47 species
Len_g45877 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11163 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429414g0020 UBP18 deubiquitinase (UBP15-21) 0.04 OrthoFinder output from all 47 species
MA_10431488g0010 UBP23 deubiquitinase (UBP23) 0.03 OrthoFinder output from all 47 species
MA_132593g0020 UBP23 Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g16110.1 UBP23 deubiquitinase (UBP23) 0.03 OrthoFinder output from all 47 species
Ore_g27850 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12821 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 163 466
IPR002893 Znf_MYND 67 104
No external refs found!