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  5. Solyc08g080090.3.1

Solyc08g080090.3.1 (NYE1, ATNYE1, Solyc08g080090)


Aliases : NYE1, ATNYE1, Solyc08g080090

Description : magnesium dechelatase


Gene families : OG0001394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g080090.3.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00195910 NYE1, ATNYE1,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.08 OrthoFinder output from all 47 species
AT4G11910 No alias INVOLVED IN: biological_process unknown; LOCATED IN:... 0.01 OrthoFinder output from all 47 species
AT4G11911 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 OrthoFinder output from all 47 species
Adi_g104442 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12105 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51673 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20326 No alias magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05133 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62657 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62658 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.25G023100.1 NYE1, ATNYE1,... magnesium dechelatase *(SGR) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g37737 No alias magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g35558 No alias magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_13585 NYE1, ATNYE1 magnesium dechelatase 0.04 OrthoFinder output from all 47 species
LOC_Os09g36200.1 NYE1, ATNYE1,... magnesium dechelatase 0.05 OrthoFinder output from all 47 species
Lfl_g22318 No alias magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34485 No alias magnesium dechelatase *(SGR) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07358 No alias magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10429 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33670 No alias magnesium dechelatase *(SGR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63834 NYE1, ATNYE1 magnesium dechelatase *(SGR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034801_P001 NYE1, ATNYE1,... magnesium dechelatase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR024438 Staygreen 49 200
No external refs found!