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  5. Solyc08g081520.1.1

Solyc08g081520.1.1 (ROH1, Solyc08g081520)


Aliases : ROH1, Solyc08g081520

Description : no hits & (original description: none)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g081520.1.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT1G43630 No alias Protein of unknown function (DUF793) 0.08 OrthoFinder output from all 47 species
AT1G63930 ROH1 from the Czech 'roh' meaning 'corner' 0.06 OrthoFinder output from all 47 species
AT1G74450 No alias Protein of unknown function (DUF793) 0.03 OrthoFinder output from all 47 species
Adi_g024370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28173 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g01622 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18743.t1 Aspi01Gene18743 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64303.t1 Aspi01Gene64303 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15879 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z027800.1 Ceric.1Z027800 not classified & original description: pacid=50597254... 0.03 OrthoFinder output from all 47 species
Ceric.28G062100.1 Ceric.28G062100 not classified & original description: pacid=50570697... 0.05 OrthoFinder output from all 47 species
Ceric.39G042700.1 BPS1, Ceric.39G042700 not classified & original description: pacid=50583441... 0.03 OrthoFinder output from all 47 species
Dac_g13361 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019411001 ROH1 No description available 0.03 OrthoFinder output from all 47 species
Gb_22841 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_22842 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g06440.1 LOC_Os11g06440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g07603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24841 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g094950.3.1 Solyc01g094950 Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g07215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02494 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31232 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004370_P001 Zm00001e004370 UPF0496 protein 4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 1 393
No external refs found!