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  5. Solyc09g007760.4.1

Solyc09g007760.4.1 (PIP2;1, PIP2, PIP2A,...)


Aliases : PIP2;1, PIP2, PIP2A, Solyc09g007760

Description : plasma membrane intrinsic protein (PIP)


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g007760.4.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g09331 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04855 TIP1;2, TIP2,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g39117 PIP3, SIMIP,... plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G093900.1 PIP2;1, PIP2,... plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Dde_g21631 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01032861001 PIP1;5, PIP1D Solute transport.channels.MIP family.plasma membrane... 0.02 OrthoFinder output from all 47 species
Gb_02390 ATTIP2;1,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Gb_25884 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g13120.1 TIP4;1, LOC_Os01g13120 tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g47220.1 PIP1;5, PIP1D,... plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
LOC_Os09g36930.1 PIP3B, PIP2;8,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Len_g04150 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Len_g10418 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00359 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07275 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Ore_g10060 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008268 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Spa_g49548 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 30 260
No external refs found!