Aliases : Solyc09g008120
Description : RNA helicase (Prp22)
Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00166450 | evm_27.TU.AmTr_v1... | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00090p00083520 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00110p00073830 | ESP3, EMB2733,... | RNA processing.RNA splicing.spliceosome... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G26370 | No alias | RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G27900 | No alias | RNA helicase family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G35340 | MEE29 | helicase domain-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G47250 | No alias | RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G62310 | No alias | RNA helicase family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT4G18465 | No alias | RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008219 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g045408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g084485 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g107993 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g11422 | No alias | RNA helicase *(Prp22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g14240 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g37436 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g11041 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G078700.1 | Ceric.04G078700 | not classified & original description: pacid=50630845... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G075900.1 | EMB3011, Ceric.21G075900 | RNA helicase *(Prp16) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000796.23 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000984.27 | ESP3, EMB2733 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | OrthoFinder output from all 47 species | |
| Cre07.g329150 | No alias | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | OrthoFinder output from all 47 species | |
| Cre07.g349100 | ESP3, EMB2733 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g20233 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g13368 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g22478 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07449 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g48013 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g14594 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g25246 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g11370.1 | LOC_Os01g11370 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g32430.1 | EMB3011, LOC_Os07g32430 | RNA helicase (Prp16) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g20554.1 | LOC_Os11g20554 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09738 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g31554 | No alias | RNA helicase *(Prp22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_4084g0010 | HVT1, ATVT-1 | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g02780.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g16380.1 | ESP3, EMB2733 | RNA helicase (Prp2) | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g03460.1 | EMB3011 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14081 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g07572 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g12800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10558 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44705 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g07808 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17516 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0034.g011158 | No alias | not classified & original description: CDS=170-2296 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03727 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06275 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g08957 | No alias | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16823 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48742 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02106 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12928 | No alias | RNA helicase *(Prp22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g28400 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31207 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016478_P002 | Zm00001e016478 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022095_P001 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028404_P001 | Zm00001e028404 | RNA helicase (Prp22) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006555 | methionine metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | HCCA |
| MF | GO:0008172 | S-methyltransferase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009086 | methionine biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0030832 | regulation of actin filament length | IEP | HCCA |
| BP | GO:0030833 | regulation of actin filament polymerization | IEP | HCCA |
| BP | GO:0032271 | regulation of protein polymerization | IEP | HCCA |
| BP | GO:0032535 | regulation of cellular component size | IEP | HCCA |
| BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | HCCA |
| BP | GO:0032970 | regulation of actin filament-based process | IEP | HCCA |
| BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | HCCA |
| BP | GO:0065008 | regulation of biological quality | IEP | HCCA |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | HCCA |
| BP | GO:0110053 | regulation of actin filament organization | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | HCCA |
| No external refs found! |
