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  5. Solyc09g011770.3.1

Solyc09g011770.3.1 (Solyc09g011770)


Aliases : Solyc09g011770

Description : no hits & (original description: none)


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc09g011770.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00120720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
AT5G01070 No alias RING/FYVE/PHD zinc finger superfamily protein 0.01 OrthoFinder output from all 47 species
Aob_g05736 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06049 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10273 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os06g46366.1 LOC_Os06g46366 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Msp_g26464 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03085 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g020018 No alias not classified & original description: CDS=310-1482 0.03 OrthoFinder output from all 47 species
Solyc01g067800.3.1 Solyc01g067800 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc06g076610.3.1 Solyc06g076610 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 109 160
No external refs found!