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  5. Solyc09g011780.3.1

Solyc09g011780.3.1 (MYB1, AtMYB1, Solyc09g011780)


Aliases : MYB1, AtMYB1, Solyc09g011780

Description : transcription factor (MYB)


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g011780.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 AtMYB98, MYB98,... RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
AT2G25230 MYB100, AtMYB100 myb domain protein 100 0.02 OrthoFinder output from all 47 species
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.01 OrthoFinder output from all 47 species
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 OrthoFinder output from all 47 species
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.01 OrthoFinder output from all 47 species
AT5G40430 MYB22, AtMYB22 myb domain protein 22 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021038.78 MYB3R-3, AtMYB3R3 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Cre07.g345350 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01007731001 AtMYB98, MYB98 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
GSVIVT01024774001 MYB64, AtMYB64 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
LOC_Os01g63680.1 PGA37, ATMYB118,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Len_g38581 MYB3R-3, AtMYB3R3 R1R2R3-MYB transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426233g0010 MYB3R-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_4704g0010 AtMYB117, LOF1, MYB117 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Ppi_g15273 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 119 162
IPR001005 SANT/Myb 67 112
No external refs found!