Solyc09g065120.4.1 (SCY2, EMB2289, Solyc09g065120)

Aliases : SCY2, EMB2289, Solyc09g065120

Description : component SecY2 of inner envelope Sec2 post-import insertion system

Gene families : OG0005693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005693_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g065120.4.1
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene39464.t1	SCY2, EMB2289,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.25G055200.1	SCY2, EMB2289,...	component *(SecY2) of inner envelope Sec2 post-import...	0.05	OrthoFinder output from all 47 species
Cre03.g158250	SCY2, EMB2289	No description available	0.03	OrthoFinder output from all 47 species
Gb_28420	SCY2, EMB2289	component SecY2 of inner envelope Sec2 post-import...	0.03	OrthoFinder output from all 47 species
LOC_Os05g33020.1	SCY2, EMB2289,...	component SecY2 of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species
MA_10435989g0010	SCY2, EMB2289	Preprotein translocase subunit SCY2, chloroplastic...	0.02	OrthoFinder output from all 47 species
Ppi_g31235	SCY2, EMB2289	component *(SecY2) of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	HCCA
MF	GO:0008184	glycogen phosphorylase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002208	SecY/SEC61-alpha	208	554

External Links

No external refs found!