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  5. Solyc09g074520.3.1

Solyc09g074520.3.1 (TIR1, Solyc09g074520)


Aliases : TIR1, Solyc09g074520

Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g074520.3.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Aob_g24321 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Cba_g45655 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G096900.1 AFB2, Ceric.01G096900 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dcu_g10257 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
LOC_Os03g08850.1 AFB5, LOC_Os03g08850 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Ppi_g15556 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014055 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Sam_g09796 No alias component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e015908_P001 Zm00001e015908 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041567 COI1_F-box 3 43
IPR041101 Transp_inhibit 62 108
No external refs found!