Aliases : Solyc09g074640
Description : C3H zinc finger transcription factor
Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc09g074640.3.1 | |
| Cluster | HCCA: Cluster_86 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aspi01Gene29128.t1 | ZFN1, Aspi01Gene29128 | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0018.g014767 | ZFN1 | regulatory protein of RNA homeostasis & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0384.g067499 | No alias | regulatory protein of RNA homeostasis & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.16G041800.1 | ZFN1, Ceric.16G041800 | regulatory protein of RNA homeostasis & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003977001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01010980001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g41880 | No alias | regulatory protein of RNA homeostasis & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17909 | No alias | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05215 | ZFN3 | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| No external refs found! |
