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  5. Solyc09g082760.3.1

Solyc09g082760.3.1 (ATAPA1, APA1, Solyc09g082760)


Aliases : ATAPA1, APA1, Solyc09g082760

Description : pepsin-type protease


Gene families : OG0000857 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000857_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g082760.3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Adi_g001178 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dac_g08448 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ehy_g01269 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01017701001 ATAPA1, APA1 Protein degradation.peptidase families.aspartic-type... 0.05 OrthoFinder output from all 47 species
GSVIVT01031327001 ATAPA1, APA1 Protein degradation.peptidase families.aspartic-type... 0.05 OrthoFinder output from all 47 species
GSVIVT01031329001 ATAPA1, APA1 Protein degradation.peptidase families.aspartic-type... 0.04 OrthoFinder output from all 47 species
Pir_g60457 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Zm00001e020391_P004 ATAPA1, APA1,... pepsin-type protease 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR008138 SapB_2 313 339
IPR007856 SapB_1 371 407
IPR033121 PEPTIDASE_A1 77 494
No external refs found!