1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g082890.2.1

Solyc09g082890.2.1 (Solyc09g082890)


Aliases : Solyc09g082890

Description : Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana (sp|q9lik7|aca13_arath : 396.0)


Gene families : OG0000086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g082890.2.1

Target Alias Description ECC score Gene Family Method Actions
AT3G22910 No alias ATPase E1-E2 type family protein / haloacid... 0.08 OrthoFinder output from all 47 species
Adi_g020513 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Ala_g15258 ATACA10, CIF1, ACA10 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.05 OrthoFinder output from all 47 species
Ala_g29249 ATACA10, CIF1, ACA10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g29250 ATACA10, CIF1, ACA10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29469 ACA8, AT-ACA8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g45267 ACA8, AT-ACA8 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g22137 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.04 OrthoFinder output from all 47 species
Aop_g03242 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Aop_g60413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22841.t1 ACA9, ATACA9,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001552 No alias P2B-type calcium cation-transporting ATPase *(ACA) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026509 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.04 OrthoFinder output from all 47 species
Azfi_s1605.g104568 ATACA10, CIF1, ACA10 not classified & original description: CDS=1-669 0.05 OrthoFinder output from all 47 species
Cba_g75955 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Dac_g14710 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Dac_g27001 ACA9, ATACA9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37534 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.07 OrthoFinder output from all 47 species
Dcu_g46570 ATACA10, CIF1, ACA10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000116001 ACA2 Calcium-transporting ATPase 2, plasma membrane-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01018059001 No alias Calcium-transporting ATPase 12, plasma membrane-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01021804001 No alias Putative calcium-transporting ATPase 13, plasma... 0.02 OrthoFinder output from all 47 species
LOC_Os02g08010.1 ACA8, AT-ACA8,... P2B-type calcium cation-transporting ATPase (ACA) 0.03 OrthoFinder output from all 47 species
LOC_Os02g08014.1 LOC_Os02g08014 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g08018.1 ATACA10, CIF1,... Calcium-transporting ATPase 5, plasma membrane-type... 0.03 OrthoFinder output from all 47 species
LOC_Os03g10640.1 ACA2, LOC_Os03g10640 P2B-type calcium cation-transporting ATPase (ACA) 0.05 OrthoFinder output from all 47 species
LOC_Os03g42020.1 ACA2, LOC_Os03g42020 P2B-type calcium cation-transporting ATPase (ACA) 0.03 OrthoFinder output from all 47 species
LOC_Os05g41580.1 ACA4, LOC_Os05g41580 P2B-type calcium cation-transporting ATPase (ACA) 0.02 OrthoFinder output from all 47 species
MA_341420g0020 ATACA10, CIF1, ACA10 Calcium-transporting ATPase 10, plasma membrane-type... 0.09 OrthoFinder output from all 47 species
Nbi_g06308 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.04 OrthoFinder output from all 47 species
Nbi_g09252 ACA8, AT-ACA8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10928 PEA1, ACA1 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.06 OrthoFinder output from all 47 species
Pp3c22_18760V3.1 ACA8, AT-ACA8,... autoinhibited Ca2+ -ATPase, isoform 8 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006607 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Solyc03g123890.4.1 ACA9, ATACA9,... P2B-type calcium cation-transporting ATPase (ACA) 0.07 OrthoFinder output from all 47 species
Spa_g39872 ECA2, ATECA2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46307 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR004014 ATPase_P-typ_cation-transptr_N 105 172
No external refs found!