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  5. Solyc09g090100.3.1

Solyc09g090100.3.1 (ATCRY2, CRY2, PHH1,...)


Aliases : ATCRY2, CRY2, PHH1, AT-PHH1, FHA, Solyc09g090100

Description : cryptochrome photoreceptor (CRY)


Gene families : OG0000814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090100.3.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G04400 ATCRY2, CRY2,... cryptochrome 2 0.03 OrthoFinder output from all 47 species
AT4G08920 HY4, ATCRY1,... cryptochrome 1 0.04 OrthoFinder output from all 47 species
Adi_g076892 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21204 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04905 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01276 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12860 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G012600.1 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03284 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49497 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014894_P002 HY4, ATCRY1,... cryptochrome photoreceptor (CRY) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 284 481
IPR006050 DNA_photolyase_N 7 167
No external refs found!