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  5. Solyc09g098385.1.1

Solyc09g098385.1.1 (Solyc09g098385)


Aliases : Solyc09g098385

Description : Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum (sp|p62981|rs27a_soltu : 102.0)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g098385.1.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene04828.t1 UBQ11, Aspi01Gene04828 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20739.t1 UBQ11, Aspi01Gene20739 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23078.t1 UBQ4, Aspi01Gene23078 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23079.t1 UBQ4, Aspi01Gene23079 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04523 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16348 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30359 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g39498 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28672 RUB1, ATRUB1, NEDD8 ubiquitin-fold protein (RUB) 0.06 OrthoFinder output from all 47 species
Len_g18800 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22941 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10071632g0010 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
Nbi_g32009 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g21361 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 7 76
No external refs found!