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  5. Solyc10g005690.3.1

Solyc10g005690.3.1 (ATCLC-F, CLCF, CLC-F,...)


Aliases : ATCLC-F, CLCF, CLC-F, Solyc10g005690

Description : anion channel / anion:proton antiporter (CLC)


Gene families : OG0002475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005690.3.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Ala_g13328 ATCLC-F, CLCF, CLC-F anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Als_g15238 ATCLC-F, CLCF, CLC-F anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene58859.t1 ATCLC-F, CLCF,... anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species
Ceric.04G050000.1 ATCLC-F, CLCF,... anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Dac_g01762 ATCLC-F, CLCF, CLC-F anion channel / anion:proton antiporter *(CLC) &... 0.05 OrthoFinder output from all 47 species
Ehy_g12561 ATCLC-F, CLCF, CLC-F anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Nbi_g03127 ATCLC-F, CLCF, CLC-F anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species
Ppi_g43225 ATCLC-F, CLCF, CLC-F anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Tin_g03481 ATCLC-F, CLCF, CLC-F anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Zm00001e015677_P001 ATCLC-F, CLCF,... anion channel / anion:proton antiporter (CLC) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005534 galactose binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0048029 monosaccharide binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001807 Cl-channel_volt-gated 190 511
IPR000644 CBS_dom 675 709
IPR000644 CBS_dom 582 636
No external refs found!