1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g017550.4.1

Solyc10g017550.4.1 (ADF11, Solyc10g017550)


Aliases : ADF11, Solyc10g017550

Description : actin-depolymerizing factor


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g017550.4.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00214610 ADF5, ATADF5,... Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
AMTR_s00140p00036970 ADF8,... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
AT1G01750 ADF11 actin depolymerizing factor 11 0.04 OrthoFinder output from all 47 species
AT4G00680 ADF8 actin depolymerizing factor 8 0.05 OrthoFinder output from all 47 species
AT4G25590 ADF7 actin depolymerizing factor 7 0.05 OrthoFinder output from all 47 species
AT5G52360 ADF10 actin depolymerizing factor 10 0.06 OrthoFinder output from all 47 species
Azfi_s0005.g009152 ADF7 actin-depolymerizing factor & original description: CDS=19-414 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015454 ADF6, ATADF6 actin-depolymerizing factor & original description: CDS=1-417 0.03 OrthoFinder output from all 47 species
Cba_g31809 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06874 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02536 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025018001 ATADF4, ADF4 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01026879001 ADF11 Cytoskeleton.microfilament network.actin... 0.08 OrthoFinder output from all 47 species
GSVIVT01027807001 ADF6, ATADF6 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028963001 ADF7 Cytoskeleton.microfilament network.actin... 0.08 OrthoFinder output from all 47 species
LOC_Os02g44470.1 ADF11, LOC_Os02g44470 actin-depolymerizing factor 0.07 OrthoFinder output from all 47 species
LOC_Os03g13950.1 ADF5, ATADF5,... actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g46910.1 ADF7, LOC_Os04g46910 actin-depolymerizing factor 0.09 OrthoFinder output from all 47 species
LOC_Os07g30090.2 ADF7, LOC_Os07g30090 actin-depolymerizing factor 0.07 OrthoFinder output from all 47 species
Lfl_g05171 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10342253g0010 ATADF1, ADF1, atadf actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
MA_10433573g0020 ADF6, ATADF6 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Msp_g12632 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38081 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28943 ADF7 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007293_P001 ADF11, Zm00001e007293 actin-depolymerizing factor 0.04 OrthoFinder output from all 47 species
Zm00001e023183_P001 ADF7, Zm00001e023183 actin-depolymerizing factor 0.07 OrthoFinder output from all 47 species
Zm00001e034985_P001 ADF11, Zm00001e034985 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 14 134
No external refs found!