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  5. Solyc10g017725.1.1

Solyc10g017725.1.1 (ORF240B, Solyc10g017725)


Aliases : ORF240B, Solyc10g017725

Description : no hits & (original description: none)


Gene families : OG0002484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002484_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g017725.1.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Solyc02g005608.1.1 ORF240B, Solyc02g005608 Retrovirus-related Pol polyprotein from transposon RE1... 0.07 OrthoFinder output from all 47 species
Solyc05g025665.1.1 ORF240B, Solyc05g025665 Retrovirus-related Pol polyprotein from transposon RE1... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!