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  5. Solyc10g019000.3.1

Solyc10g019000.3.1 (YCF2.1, Solyc10g019000)


Aliases : YCF2.1, Solyc10g019000

Description : regulatory component YCF2 of AAA-ATPase motor complex


Gene families : OG0003470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g019000.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00217120 YCF2.1,... Protein Ycf2 OS=Amborella trichopoda 0.01 OrthoFinder output from all 47 species
ATCG00860 YCF2.1 Chloroplast Ycf2;ATPase, AAA type, core 0.02 OrthoFinder output from all 47 species
ATCG01280 YCF2.2 Chloroplast Ycf2;ATPase, AAA type, core 0.02 OrthoFinder output from all 47 species
GSVIVT01029605001 No alias Protein Ycf2 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Solyc00g500239.1.1 YCF2.1, Solyc00g500239 regulatory component YCF2 of AAA-ATPase motor complex 0.06 OrthoFinder output from all 47 species
Solyc01g017290.1.1 YCF2.1, Solyc01g017290 regulatory component YCF2 of AAA-ATPase motor complex 0.11 OrthoFinder output from all 47 species
Solyc06g048990.1.1 YCF2.1, Solyc06g048990 Protein Ycf2 OS=Nicotiana tomentosiformis... 0.01 OrthoFinder output from all 47 species
Solyc07g021110.1.1 YCF2.1, Solyc07g021110 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc11g040080.1.1 YCF2.1, Solyc11g040080 Protein Ycf2 A OS=Atropa belladonna... 0.01 OrthoFinder output from all 47 species
Solyc12g035790.2.1 YCF2.1, Solyc12g035790 regulatory component YCF2 of AAA-ATPase motor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA

No InterPro domains available for this sequence

No external refs found!