Solyc10g047530.2.1 (RPT3, NPH3, JK218,...)


Aliases : RPT3, NPH3, JK218, Solyc10g047530

Description : component NPH3 of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g047530.2.1

Target Alias Description ECC score Gene Family Method Actions
AT5G10250 DOT3 Phototropic-responsive NPH3 family protein 0.06 OrthoFinder output from all 47 species
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.06 OrthoFinder output from all 47 species
AT5G67440 NPY3 Phototropic-responsive NPH3 family protein 0.06 OrthoFinder output from all 47 species
Ala_g32547 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g08124 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aspi01Gene00447.t1 Aspi01Gene00447 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08949.t1 Aspi01Gene08949 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g025021 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046412 No alias not classified & original description: CDS=1316-3601 0.04 OrthoFinder output from all 47 species
Ceric.34G006100.1 Ceric.34G006100 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dde_g31714 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01016261001 No alias BTB/POZ domain-containing protein At5g03250... 0.03 OrthoFinder output from all 47 species
GSVIVT01035968001 MAB4, NPY1, ENP BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_41063 RPT3, NPH3, JK218 Root phototropism protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g35970.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Len_g16088 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_52004g0010 RPT3, NPH3, JK218 component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Msp_g13254 RPT3, NPH3, JK218 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01322 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Nbi_g04882 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g20228 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g65173 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0145.g023009 No alias not classified & original description: CDS=496-1932 0.02 OrthoFinder output from all 47 species
Solyc01g098820.3.1 RPT3, NPH3,... Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc03g044090.4.1 NPY2, Solyc03g044090 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g14756 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g16161 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Spa_g22065 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Spa_g39095 MAB4, NPY1, ENP not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45578 MAB4, NPY1, ENP not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47140 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Zm00001e014883_P001 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.07 OrthoFinder output from all 47 species
Zm00001e014998_P003 Zm00001e014998 BTB/POZ domain-containing protein At1g67900... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 230 520
No external refs found!