Solyc10g047825.1.1 (Solyc10g047825)


Aliases : Solyc10g047825

Description : no hits & (original description: none)


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g047825.1.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g14954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g24386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16603.t1 CRK8, Aspi01Gene16603 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25266.t1 Aspi01Gene25266 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34307.t1 CRK8, Aspi01Gene34307 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031819001 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_02348 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_08357 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Len_g15934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c8_15930V3.1 Pp3c8_15930 No annotation 0.01 OrthoFinder output from all 47 species
Sam_g02941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g061755.1.1 Solyc11g061755 Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Solyc12g014595.1.1 SVL4, Solyc12g014595 Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Spa_g20554 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!