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  5. Solyc10g075118.1.1

Solyc10g075118.1.1 (Solyc10g075118)


Aliases : Solyc10g075118

Description : Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum (sp|q03461|nltp2_tobac : 128.0)


Gene families : OG0000407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g075118.1.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00066810 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Malus domestica 0.04 OrthoFinder output from all 47 species
AMTR_s00077p00067510 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Malus domestica 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00070120 LTP4,... Non-specific lipid-transfer protein OS=Helianthus annuus 0.05 OrthoFinder output from all 47 species
AMTR_s00092p00021420 LTP5,... Non-specific lipid-transfer protein A OS=Ricinus communis 0.05 OrthoFinder output from all 47 species
AMTR_s00162p00083730 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT2G18370 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT2G38530 LP2, cdf3, LTP2 lipid transfer protein 2 0.03 OrthoFinder output from all 47 species
AT2G38540 LTP1, ATLTP1, LP1 lipid transfer protein 1 0.07 OrthoFinder output from all 47 species
AT3G51590 LTP12 lipid transfer protein 12 0.05 OrthoFinder output from all 47 species
AT4G28395 ATA7, A7 Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT4G28397 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
AT4G33355 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT5G01870 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT5G44265 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
Aev_g47330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05460 LTP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08094.t1 LTP4, Aspi01Gene08094 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08095.t1 Aspi01Gene08095 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08097.t1 LTP12, Aspi01Gene08097 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28784.t1 LTP4, Aspi01Gene28784 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G006400.1 Ceric.02G006400 not classified & original description: pacid=50584115... 0.02 OrthoFinder output from all 47 species
Ceric.02G006500.1 Ceric.02G006500 not classified & original description: pacid=50583964... 0.03 OrthoFinder output from all 47 species
Ceric.02G024100.1 Ceric.02G024100 not classified & original description: pacid=50585459... 0.03 OrthoFinder output from all 47 species
Ceric.11G012100.1 Ceric.11G012100 not classified & original description: pacid=50596478... 0.02 OrthoFinder output from all 47 species
Ceric.13G061000.1 Ceric.13G061000 not classified & original description: pacid=50635883... 0.03 OrthoFinder output from all 47 species
Ceric.13G068200.1 Ceric.13G068200 not classified & original description: pacid=50636227... 0.03 OrthoFinder output from all 47 species
Ceric.30G041400.1 LTP1, ATLTP1,... not classified & original description: pacid=50608945... 0.03 OrthoFinder output from all 47 species
Dac_g25121 LTP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48712 LTP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15981 LTP1, ATLTP1, LP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15056 LTP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24012 LTP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24013 LP2, cdf3, LTP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24014 LP2, cdf3, LTP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29058 LTP1, ATLTP1, LP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29676 LP2, cdf3, LTP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006001001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01021772001 No alias Non-specific lipid-transfer protein C,... 0.03 OrthoFinder output from all 47 species
GSVIVT01024563001 LTP5 Non-specific lipid-transfer protein 1 OS=Morus nigra 0.05 OrthoFinder output from all 47 species
GSVIVT01027088001 No alias Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia 0.03 OrthoFinder output from all 47 species
GSVIVT01030190001 No alias Non-specific lipid-transfer protein P5 OS=Vitis sp. 0.03 OrthoFinder output from all 47 species
Gb_00826 No alias Non-specific lipid-transfer protein 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_02341 LTP3 Non-specific lipid-transfer protein OS=Pinus taeda... 0.05 OrthoFinder output from all 47 species
Gb_02342 LTP3 Non-specific lipid-transfer protein OS=Pinus taeda... 0.04 OrthoFinder output from all 47 species
Gb_20253 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_20255 No alias Non-specific lipid-transfer protein OS=Gerbera hybrida... 0.04 OrthoFinder output from all 47 species
Gb_23000 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_25561 LTP3 Non-specific lipid-transfer protein 4 (Fragment) OS=Lens... 0.03 OrthoFinder output from all 47 species
Gb_36100 LTP3 Non-specific lipid-transfer protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_41631 No alias Non-specific lipid-transfer protein 3 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
Gb_41632 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g59380.1 LOC_Os03g59380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g40010.1 LOC_Os05g40010 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g34840.1 LOC_Os06g34840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g02350.1 LOC_Os11g02350 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os11g02369.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2A OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g02320.1 LOC_Os12g02320 Non-specific lipid-transfer protein 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g02330.2 LTP3, LOC_Os12g02330 Non-specific lipid-transfer protein 1 OS=Morus nigra... 0.02 OrthoFinder output from all 47 species
Lfl_g00161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434303g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.03 OrthoFinder output from all 47 species
MA_110959g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_209545g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.02 OrthoFinder output from all 47 species
MA_307546g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_355839g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_422961g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_50251g0010 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
MA_5482715g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6565643g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.05 OrthoFinder output from all 47 species
MA_7609080g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_903132g0010 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.04 OrthoFinder output from all 47 species
Msp_g29975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14482 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019322 No alias not classified & original description: CDS=195-662 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019327 No alias not classified & original description: CDS=54-425 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023749 LTP1, ATLTP1, LP1 not classified & original description: CDS=116-469 0.03 OrthoFinder output from all 47 species
Solyc01g081590.4.1 LTP6, Solyc01g081590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g005780.1.1 Solyc06g005780 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g059830.3.1 Solyc06g059830 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc08g067510.1.1 LTP3, Solyc08g067510 no description available(sp|a0a2j6kl39|nltp_lacsa : 101.0) 0.04 OrthoFinder output from all 47 species
Solyc08g067550.1.1 Solyc08g067550 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g008500.3.1 Solyc09g008500 Non-specific lipid-transfer protein 2 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc09g150148.1.1 Solyc09g150148 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc10g075070.3.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 1 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Solyc10g075090.3.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Solyc10g075103.1.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Tin_g40525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019437_P001 Zm00001e019437 Non-specific lipid-transfer protein 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e037122_P001 Zm00001e037122 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e039316_P001 LTP3, Zm00001e039316 Non-specific lipid-transfer protein OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e040319_P005 Zm00001e040319 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 26 109
No external refs found!