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  5. Solyc10g076790.2.1

Solyc10g076790.2.1 (PIR1, MAP1, AUX1,...)


Aliases : PIR1, MAP1, AUX1, WAV5, Solyc10g076790

Description : auxin transporter (AUX/LAX)


Gene families : OG0000450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g076790.2.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT2G21050 LAX2 like AUXIN RESISTANT 2 0.03 OrthoFinder output from all 47 species
Adi_g010901 LAX3 auxin transporter *(AUX/LAX) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098244 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105569 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33370 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48042 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07362 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07835 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21955.t1 LAX2, Aspi01Gene21955 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15276 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38825 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G069800.1 PIR1, MAP1,... auxin transporter *(AUX/LAX) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g15314 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03380 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17600 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25859 PIR1, MAP1, AUX1, WAV5 auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
LOC_Os03g14080.1 LAX2, LOC_Os03g14080 auxin transporter (AUX/LAX) 0.04 OrthoFinder output from all 47 species
LOC_Os05g37470.1 PIR1, MAP1,... auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
LOC_Os10g05690.1 LAX2, LOC_Os10g05690 auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
Len_g21675 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36047 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13728 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11321 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25880 No alias auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Smo127494 LAX1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Smo439204 PIR1, MAP1, AUX1, WAV5 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Solyc01g111310.3.1 LAX2, Solyc01g111310 auxin transporter (AUX/LAX) 0.04 OrthoFinder output from all 47 species
Zm00001e001017_P003 LAX2, Zm00001e001017 auxin transporter (AUX/LAX) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 44 437
No external refs found!