1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g078920.3.1

Solyc10g078920.3.1 (WCRKC1, Solyc10g078920)


Aliases : WCRKC1, Solyc10g078920

Description : Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana (sp|q9fg36|trl31_arath : 155.0)


Gene families : OG0003501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003501_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g078920.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00170520 WCRKC1,... Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g17986 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09674.t1 WCRKC1, Aspi01Gene09674 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54858.t1 WCRKC2, Aspi01Gene54858 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78057 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g01274 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033478001 WCRKC2 Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_10427 WCRKC2 Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g53400.1 WCRKC2, LOC_Os02g53400 Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa... 0.11 OrthoFinder output from all 47 species
Len_g17068 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09337 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19467 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024567 WCRKC2 plastidial thioredoxin *(TrxL2) & original description:... 0.02 OrthoFinder output from all 47 species
Smo122603 WCRKC2 Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Tin_g27254 WCRKC2 plastidial thioredoxin *(TrxL2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016008_P002 WCRKC1, Zm00001e016008 Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 93 141
No external refs found!