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  5. Solyc10g079070.2.1

Solyc10g079070.2.1 (Solyc10g079070)


Aliases : Solyc10g079070

Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g079070.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00149100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Aob_g29567 CIB5 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g21794 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene62580.t1 Aspi01Gene62580 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15079 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Cba_g15801 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31539 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G084700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g03262 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033350001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
LOC_Os09g31300.1 LOC_Os09g31300 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Lfl_g07763 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24040 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Msp_g26514 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03844 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18384 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26644 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28847 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Solyc03g044460.1.1 HEC2, Solyc03g044460 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e027758_P002 Zm00001e027758 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e036408_P003 SPT, Zm00001e036408 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 204 251
No external refs found!