Solyc10g079370.3.1 (Solyc10g079370)

Aliases : Solyc10g079370

Description : basal transcription factor (TFIIb)

Gene families : OG0001894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001894_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g079370.3.1
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method	Actions
Dde_g02695	No alias	basal transcription factor *(TFIIb) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g05766	No alias	basal transcription factor *(TFIIb) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0008134	transcription factor binding	None	Extended
MF	GO:0017025	TBP-class protein binding	IEA	Interproscan
MF	GO:0140296	general transcription initiation factor binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013137	Znf_TFIIB	4	46
IPR013150	TFIIB_cyclin	109	173

External Links

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