Solyc10g080200.2.1 (Solyc10g080200)

Aliases : Solyc10g080200

Description : C2H2 zinc finger transcription factor

Gene families : OG0002397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g080200.2.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G28210	PMZ, SAP12	zinc finger (AN1-like) family protein	0.02	OrthoFinder output from all 47 species
Cba_g21534	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.17G055100.1	PMZ, SAP12,...	not classified & original description: pacid=50618072...	0.02	OrthoFinder output from all 47 species
Dde_g25235	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Pnu_g06672	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005871	No alias	not classified & original description: CDS=88-987	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000058	Znf_AN1	101	141
IPR000058	Znf_AN1	13	50

External Links

No external refs found!