Solyc10g085180.2.1 (AL1, Solyc10g085180)

Aliases : AL1, Solyc10g085180

Description : Alfin-like transcription factor

Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g085180.2.1
Cluster	HCCA: Cluster_136

Target	Alias	Description	ECC score	Gene Family Method
Adi_g013182	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Als_g21260	AL1	methylation reader Alfin of PRC1 complex & original...	0.04	OrthoFinder output from all 47 species
Als_g28750	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene02860.t1	AL2, Aspi01Gene02860	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene62514.t1	AL1, Aspi01Gene62514	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Cba_g03032	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Cba_g23274	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Cba_g33237	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Ceric.07G032800.1	AL2, Ceric.07G032800	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Dac_g08511	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Dac_g27389	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Dac_g30272	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Ehy_g08950	AL5	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Gb_31424	AL5	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species
Len_g12567	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Lfl_g38122	AL4	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Nbi_g04136	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Ppi_g49107	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Zm00001e027483_P002	AL1, Zm00001e027483	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e035527_P001	AL5, Zm00001e035527	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	HCCA
CC	GO:0005666	RNA polymerase III complex	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006383	transcription by RNA polymerase III	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0030880	RNA polymerase complex	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	187	234
IPR021998	Alfin_N	10	135

External Links

No external refs found!

Solyc10g085180.2.1 (AL1, Solyc10g085180)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation