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  5. Solyc10g086110.1.1

Solyc10g086110.1.1 (Solyc10g086110)


Aliases : Solyc10g086110

Description : no hits & (original description: none)


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g086110.1.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT1G29640 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
Adi_g031952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16313 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g03162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G065200.1 Ceric.01G065200 not classified & original description: pacid=50591727... 0.02 OrthoFinder output from all 47 species
Ceric.23G037500.1 Ceric.23G037500 not classified & original description: pacid=50611516... 0.03 OrthoFinder output from all 47 species
GSVIVT01004631001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01037661001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g52730.1 LOC_Os01g52730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g54450.1 LOC_Os01g54450 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g30513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434437g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_19374g0040 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5080831g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g06646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18742 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005504 No alias not classified & original description: CDS=1-846 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0450.g027397 No alias not classified & original description: CDS=1-765 0.04 OrthoFinder output from all 47 species
Sam_g33602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g006275.1.1 Solyc10g006275 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e007566_P001 Zm00001e007566 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012668_P001 Zm00001e012668 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019921_P001 Zm00001e019921 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e039074_P001 Zm00001e039074 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 40 158
No external refs found!