Aliases : Solyc11g005310
Description : RING-H2-class E3 ligase
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00056p00122930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G18773 | No alias | RING/U-box superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| AT4G09120 | No alias | RING/U-box superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
| AT4G09130 | No alias | RING/U-box superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g018606 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04830 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10161 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18221 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g31953 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01064 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14727 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12044 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g27490 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g26663 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g43673 | No alias | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g49099 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G045100.1 | Ceric.06G045100 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.18G057400.1 | RHA3A, Ceric.18G057400 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.36G023100.1 | Ceric.36G023100 | not classified & original description: pacid=50568780... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G050500.1 | BRH1, Ceric.36G050500 | not classified & original description: pacid=50569096... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g02003 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g03693 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g36466 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g05418 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08522 | BRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g15134 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22374 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g29562 | ATL2, TL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012020001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028306001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g55110.1 | LOC_Os01g55110 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g64620.1 | LOC_Os01g64620 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g50100.1 | LOC_Os04g50100 | RING-H2-class E3 ligase | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os05g29676.1 | LOC_Os05g29676 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g34560.1 | ATL43, LOC_Os06g34560 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g45580.1 | RHA3A, LOC_Os06g45580 | RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g00994 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02874 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g31335 | ATRING1, RING1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429091g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_130176g0010 | No alias | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| MA_169947g0010 | BRH1 | Probable E3 ubiquitin-protein ligase RHA1A... | 0.02 | OrthoFinder output from all 47 species | |
| MA_308999g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_43248g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_5218469g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_611616g0010 | No alias | RING-H2-class E3 ligase | 0.08 | OrthoFinder output from all 47 species | |
| MA_77628g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_80729g0030 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g08270.1 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g14690 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g14691 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41633 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g26309 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g02769 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g067680.1.1 | Solyc02g067680 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g005280.1.1 | Solyc11g005280 | RING-H2-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g007530.2.1 | Solyc11g007530 | RING-H2-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g16305 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010787_P001 | ATL3, Zm00001e010787 | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015495_P001 | Zm00001e015495 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023515_P001 | Zm00001e023515 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 140 | 183 |
| No external refs found! |
