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  5. Solyc11g005860.2.1

Solyc11g005860.2.1 (Solyc11g005860)


Aliases : Solyc11g005860

Description : no hits & (original description: none)


Gene families : OG0001578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001578_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g005860.2.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00079220 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00079410 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00081130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00081750 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Ala_g14539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39847.t1 Aspi01Gene39847 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39865.t1 Aspi01Gene39865 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034491 No alias not classified & original description: CDS=2-1894 0.02 OrthoFinder output from all 47 species
Dcu_g13076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_00368 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g52900.1 LOC_Os01g52900 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os12g08900.1 LOC_Os12g08900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g61601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022604 No alias not classified & original description: CDS=40-3546 0.03 OrthoFinder output from all 47 species
Smo128002 No alias No description available 0.02 OrthoFinder output from all 47 species
Tin_g14607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021339_P001 Zm00001e021339 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR000192 Aminotrans_V_dom 112 432
No external refs found!