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  5. Solyc11g011370.2.1

Solyc11g011370.2.1 (EMB2656, Solyc11g011370)


Aliases : EMB2656, Solyc11g011370

Description : component CAP-G of condensin I complex


Gene families : OG0004871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g011370.2.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00100190 EMB2656,... Cell cycle.mitosis and meiosis.chromatin... 0.08 OrthoFinder output from all 47 species
AT5G37630 EMB2656 ARM repeat superfamily protein 0.12 OrthoFinder output from all 47 species
Ala_g23197 EMB2656 component *(CAP-G) of condensin I complex & original... 0.09 OrthoFinder output from all 47 species
Aop_g09315 EMB2656 component *(CAP-G) of condensin I complex & original... 0.13 OrthoFinder output from all 47 species
Aspi01Gene70823.t1 EMB2656, Aspi01Gene70823 component *(CAP-G) of condensin I complex & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0120.g046764 EMB2656 component *(CAP-G) of condensin I complex & original... 0.06 OrthoFinder output from all 47 species
Ceric.32G002700.1 EMB2656, Ceric.32G002700 component *(CAP-G) of condensin I complex & original... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.22 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre08.g362500 No alias Cell cycle.mitosis and meiosis.chromatin... 0.05 OrthoFinder output from all 47 species
Dac_g15975 EMB2656 component *(CAP-G) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01014028001 EMB2656 Cell cycle.mitosis and meiosis.chromatin... 0.04 OrthoFinder output from all 47 species
Gb_36529 EMB2656 component CAP-G of condensin I complex 0.09 OrthoFinder output from all 47 species
LOC_Os06g14460.1 EMB2656, LOC_Os06g14460 component CAP-G of condensin I complex 0.12 OrthoFinder output from all 47 species
Len_g02419 EMB2656 component *(CAP-G) of condensin I complex & original... 0.07 OrthoFinder output from all 47 species
Lfl_g38796 EMB2656 component *(CAP-G) of condensin I complex & original... 0.07 OrthoFinder output from all 47 species
MA_1138812g0010 EMB2656 component CAP-G of condensin I complex 0.08 OrthoFinder output from all 47 species
MA_15527g0010 EMB2656 component CAP-G of condensin I complex 0.09 OrthoFinder output from all 47 species
Mp5g14270.1 EMB2656 component CAP-G of condensin I complex 0.1 OrthoFinder output from all 47 species
Msp_g31445 EMB2656 component *(CAP-G) of condensin I complex & original... 0.12 OrthoFinder output from all 47 species
Nbi_g05893 EMB2656 component *(CAP-G) of condensin I complex & original... 0.14 OrthoFinder output from all 47 species
Ppi_g15050 EMB2656 component *(CAP-G) of condensin I complex & original... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016204 EMB2656 component *(CAP-G) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Smo75276 EMB2656 Cell cycle.mitosis and meiosis.chromatin... 0.09 OrthoFinder output from all 47 species
Spa_g46563 EMB2656 component *(CAP-G) of condensin I complex & original... 0.05 OrthoFinder output from all 47 species
Tin_g11702 EMB2656 component *(CAP-G) of condensin I complex & original... 0.07 OrthoFinder output from all 47 species
Zm00001e036753_P002 EMB2656, Zm00001e036753 component CAP-G of condensin I complex 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025977 Cnd3_C 524 871
No external refs found!