Solyc11g012470.2.1 (Solyc11g012470)


Aliases : Solyc11g012470

Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 209.0)


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g012470.2.1
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00174110 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT4G26650 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.06 OrthoFinder output from all 47 species
Sam_g10981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g048030.4.1 Solyc07g048030 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
Spa_g28993 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g15312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010648_P001 Zm00001e010648 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e035389_P001 Zm00001e035389 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 75
IPR000504 RRM_dom 107 165
No external refs found!