Aliases : NDHB.1, Solyc11g021090
Description : NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Coffea arabica (sp|p0cc49|nu2c2_cofar : 181.0)
Gene families : OG0002858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002858_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc11g021090.3.1 | |
| Cluster | HCCA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272610 | evm_27.TU.AmTr_v1... | NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00102p00105080 | evm_27.TU.AmTr_v1... | NAD(P)H-quinone oxidoreductase subunit 2 A,... | 0.09 | OrthoFinder output from all 47 species | |
| AMTR_s00543p00012290 | evm_27.TU.AmTr_v1... | NAD(P)H-quinone oxidoreductase subunit 2 B,... | 0.1 | OrthoFinder output from all 47 species | |
| AT2G07689 | No alias | NADH-Ubiquinone/plastoquinone (complex I) protein | 0.03 | OrthoFinder output from all 47 species | |
| ATCG00890 | NDHB.1 | NADH-Ubiquinone/plastoquinone (complex I) protein | 0.36 | OrthoFinder output from all 47 species | |
| ATCG01250 | NDHB.2 | NADH-Ubiquinone/plastoquinone (complex I) protein | 0.36 | OrthoFinder output from all 47 species | |
| ATMG01320 | NAD2B, NAD2.2, NAD2 | NADH dehydrogenase 2B | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g13772 | NDHB.1 | component *(NdhB) of NDH membrane subcomplex M &... | 0.28 | OrthoFinder output from all 47 species | |
| Ala_g08110 | NDHB.1 | component *(NdhB) of NDH membrane subcomplex M &... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g09956 | NDHB.1 | component *(NdhB) of NDH membrane subcomplex M &... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g16648 | NAD2B, NAD2.2, NAD2 | component *(ND2/NQO14) of NADH dehydrogenase proton... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g05863 | NDHB.1 | not classified & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| Cba_g16276 | NAD2B, NAD2.2, NAD2 | component *(ND2/NQO14) of NADH dehydrogenase proton... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.01G057300.1 | NDHB.1, Ceric.01G057300 | component *(NdhB) of NDH membrane subcomplex M &... | 0.25 | OrthoFinder output from all 47 species | |
| Ceric.05G040600.1 | NDHB.1, Ceric.05G040600 | not classified & original description: pacid=50579146... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.26G042200.1 | NDHB.1, Ceric.26G042200 | component *(NdhB) of NDH membrane subcomplex M &... | 0.15 | OrthoFinder output from all 47 species | |
| Ceric.28G022400.1 | NDHB.1, Ceric.28G022400 | not classified & original description: pacid=50570102... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.29G005900.1 | NDHB.1, Ceric.29G005900 | not classified & original description: pacid=50624802... | 0.22 | OrthoFinder output from all 47 species | |
| Ceric.29G006000.1 | NDHB.1, Ceric.29G006000 | not classified & original description: pacid=50625919... | 0.13 | OrthoFinder output from all 47 species | |
| Dcu_g42753 | NDHB.1 | component *(NdhB) of NDH membrane subcomplex M &... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01007203001 | NAD2B, NAD2.2, NAD2 | NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris | 0.08 | OrthoFinder output from all 47 species | |
| Gb_06313 | No alias | NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17281 | NDHB.1 | NAD(P)H-quinone oxidoreductase subunit 2 B,... | 0.13 | OrthoFinder output from all 47 species | |
| Gb_18608 | No alias | NAD(P)H-quinone oxidoreductase subunit 2 B,... | 0.13 | OrthoFinder output from all 47 species | |
| Gb_26291 | NDHB.1 | component NdhB of NDH membrane subcomplex M | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os04g16854.1 | NDHB.1, LOC_Os04g16854 | component NdhB of NDH membrane subcomplex M | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g25004.1 | NDHB.1, LOC_Os07g25004 | component NdhB of NDH membrane subcomplex M | 0.46 | OrthoFinder output from all 47 species | |
| LOC_Os08g15248.1 | NDHB.1, LOC_Os08g15248 | component NdhB of NDH membrane subcomplex M | 0.46 | OrthoFinder output from all 47 species | |
| Lfl_g33043 | NDHB.1 | not classified & original description: none | 0.23 | OrthoFinder output from all 47 species | |
| Lfl_g33049 | NDHB.1 | not classified & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| MA_9734021g0010 | No alias | NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25321 | NDHB.1 | component *(NdhB) of NDH membrane subcomplex M &... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25819 | NAD2B, NAD2.2, NAD2 | component *(ND2/NQO14) of NADH dehydrogenase proton... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g01088 | NDHB.1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g56892 | NDHB.1 | component *(NdhB) of NDH membrane subcomplex M &... | 0.12 | OrthoFinder output from all 47 species | |
| Sam_g15901 | No alias | component *(ND2/NQO14) of NADH dehydrogenase proton... | 0.06 | OrthoFinder output from all 47 species | |
| Smo137726 | NDHB.1 | Photosynthesis.photophosphorylation.chlororespiration.NAD... | 0.22 | OrthoFinder output from all 47 species | |
| Solyc00g125990.1.1 | Solyc00g125990 | NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc00g500314.1.1 | Solyc00g500314 | NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0031361 | obsolete integral component of thylakoid membrane | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001750 | ND/Mrp_mem | 1 | 24 |
| No external refs found! |
