Solyc11g021210.2.1 (YCF5, Solyc11g021210)

Aliases : YCF5, Solyc11g021210

Description : assembly factor CcsA of CCS cytochrome f/c6 maturation system (system II)

Gene families : OG0008998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008998_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g021210.2.1

Target	Alias	Description	ECC score	Gene Family Method
ATCG01040	YCF5	Cytochrome C assembly protein	0.04	OrthoFinder output from all 47 species
Aev_g47212	YCF5	assembly factor CcsA of CCS cytochrome f/c6 maturation...	0.05	OrthoFinder output from all 47 species
Cba_g78789	YCF5	assembly factor CcsA of CCS cytochrome f/c6 maturation...	0.07	OrthoFinder output from all 47 species
Ceric.19G029400.1	YCF5, Ceric.19G029400	assembly factor CcsA of CCS cytochrome f/c6 maturation...	0.05	OrthoFinder output from all 47 species
Ceric.35G068700.1	YCF5, Ceric.35G068700	assembly factor CcsA of CCS cytochrome f/c6 maturation...	0.05	OrthoFinder output from all 47 species
Ceric.39G055700.1	YCF5, Ceric.39G055700	assembly factor CcsA of CCS cytochrome f/c6 maturation...	0.05	OrthoFinder output from all 47 species
Gb_33050	YCF5	assembly factor CcsA of CCS cytochrome f/c6 maturation...	0.01	OrthoFinder output from all 47 species
LOC_Os06g46434.1	YCF5, LOC_Os06g46434	assembly factor CcsA of CCS cytochrome f/c6 maturation...	0.05	OrthoFinder output from all 47 species
Lfl_g37809	YCF5	assembly factor CcsA of CCS cytochrome f/c6 maturation...	0.02	OrthoFinder output from all 47 species
Solyc00g500194.1.1	YCF5, Solyc00g500194	Cytochrome c biogenesis protein CcsA OS=Solanum...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0017004	cytochrome complex assembly	IEA	Interproscan
MF	GO:0020037	heme binding	IEA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002541	Cyt_c_assembly	70	167

External Links

No external refs found!