Aliases : Solyc11g030553
Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 215.0)
Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc11g030553.1.1 | |
| Cluster | HCCA: Cluster_63 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g009671 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g024543 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036911 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13986 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g30553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g31318 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g32960 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g33725 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g38229 | ORF111A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38816 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g41858 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g44089 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g45076 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g45931 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g48904 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g49174 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g49245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g33858 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g14116 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g15605 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16460 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g27539 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g50255 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13933.t1 | Aspi01Gene13933 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17293.t1 | Aspi01Gene17293 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29223.t1 | Aspi01Gene29223 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34276.t1 | Aspi01Gene34276 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36579.t1 | CRK8, Aspi01Gene36579 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene45320.t1 | Aspi01Gene45320 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene49358.t1 | FEY3, FEY,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene52980.t1 | Aspi01Gene52980 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54062.t1 | Aspi01Gene54062 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene56506.t1 | CRK8, Aspi01Gene56506 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene59929.t1 | CRK8, Aspi01Gene59929 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene69511.t1 | CRK8, Aspi01Gene69511 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g37903 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g06167 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g09854 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09424 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02582 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13769 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_22123 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30736 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30803 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g35297 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g39738 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g37088 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g39476 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g39660 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g05418 | CRK8 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19574 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19975 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g21625 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g24316 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g29219 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g31391 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c13_14360V3.1 | Pp3c13_14360 | No annotation | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c14_6702V3.1 | Pp3c14_6702 | No annotation | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62407 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20554 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07434 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0016289 | CoA hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
