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  5. Solyc11g030830.1.1

Solyc11g030830.1.1 (PSBA, Solyc11g030830)


Aliases : PSBA, Solyc11g030830

Description : no hits & (original description: none)


Gene families : OG0001107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001107_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g030830.1.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Aev_g03797 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Aev_g33560 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ceric.01G054300.1 PSBA, Ceric.01G054300 not classified & original description: pacid=50591444... 0.03 OrthoFinder output from all 47 species
Ceric.01G066400.1 PSBA, Ceric.01G066400 not classified & original description: pacid=50590620... 0.03 OrthoFinder output from all 47 species
Ceric.02G016000.1 PSBD, Ceric.02G016000 component *(PsbD/D2) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.02G046500.1 PSBA, Ceric.02G046500 not classified & original description: pacid=50584544... 0.03 OrthoFinder output from all 47 species
Ceric.05G040100.1 PSBA, Ceric.05G040100 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.05G043300.1 PSBA, Ceric.05G043300 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.06G028100.1 PSBA, Ceric.06G028100 not classified & original description: pacid=50620820... 0.04 OrthoFinder output from all 47 species
Ceric.07G060900.1 PSBA, Ceric.07G060900 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.09G049700.1 PSBA, Ceric.09G049700 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.12G058600.1 PSBA, Ceric.12G058600 not classified & original description: pacid=50600847... 0.03 OrthoFinder output from all 47 species
Ceric.13G053600.1 PSBA, Ceric.13G053600 not classified & original description: pacid=50635334... 0.03 OrthoFinder output from all 47 species
Ceric.16G061600.1 PSBA, Ceric.16G061600 not classified & original description: pacid=50589682... 0.03 OrthoFinder output from all 47 species
Ceric.18G054200.1 PSBA, Ceric.18G054200 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z020700.1 PSBA, Ceric.1Z020700 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z022800.1 PSBD, Ceric.1Z022800 component *(PsbD/D2) of PS-II reaction center complex &... 0.04 OrthoFinder output from all 47 species
Ceric.22G078100.1 PSBA, Ceric.22G078100 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.23G081300.1 PSBD, Ceric.23G081300 component *(PsbD/D2) of PS-II reaction center complex &... 0.04 OrthoFinder output from all 47 species
Ceric.28G022100.1 PSBA, Ceric.28G022100 not classified & original description: pacid=50570095... 0.03 OrthoFinder output from all 47 species
Ceric.29G003100.1 PSBA, Ceric.29G003100 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.29G032300.1 PSBD, Ceric.29G032300 component *(PsbD/D2) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.31G004800.1 PSBA, Ceric.31G004800 not classified & original description: pacid=50574421... 0.03 OrthoFinder output from all 47 species
Ceric.33G038500.1 PSBA, Ceric.33G038500 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.34G004800.1 PSBA, Ceric.34G004800 component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ceric.35G011500.1 PSBA, Ceric.35G011500 not classified & original description: pacid=50581506... 0.03 OrthoFinder output from all 47 species
Ceric.36G044800.1 PSBA, Ceric.36G044800 not classified & original description: pacid=50568302... 0.03 OrthoFinder output from all 47 species
GSVIVT01016441001 PSBA Photosystem II protein D1 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01029661001 PSBD Photosystem II D2 protein OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
Gb_03955 PSBA Photosystem II protein D1 OS=Cryptomeria japonica... 0.04 OrthoFinder output from all 47 species
Gb_09035 PSBA Photosystem II protein D1 OS=Cryptomeria japonica... 0.04 OrthoFinder output from all 47 species
Gb_18604 PSBA Photosystem II protein D1 OS=Adiantum capillus-veneris... 0.04 OrthoFinder output from all 47 species
Gb_20129 PSBA Photosystem II protein D1 OS=Zygnema circumcarinatum... 0.04 OrthoFinder output from all 47 species
Mp1g09910.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.04 OrthoFinder output from all 47 species
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.04 OrthoFinder output from all 47 species
Ore_g00373 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Ore_g12399 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001231 PSBD not classified & original description: CDS=1-297 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002256 PSBC not classified & original description: CDS=1-531 0.02 OrthoFinder output from all 47 species
Solyc00g500130.1.1 PSBA, Solyc00g500130 component PsbA/D1 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species
Solyc00g500200.1.1 PSBA, Solyc00g500200 component PsbA/D1 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species
Solyc00g500296.1.1 PSBA, Solyc00g500296 component PsbA/D1 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species
Solyc00g500329.1.1 PSBA, Solyc00g500329 component PsbA/D1 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species
Tin_g12149 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 53 90
No external refs found!