1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g040050.3.1

Solyc11g040050.3.1 (TAF15, Solyc11g040050)


Aliases : TAF15, Solyc11g040050

Description : component TAF15 of TFIId basal transcription regulation complex


Gene families : OG0003584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003584_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g040050.3.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00107550 TAF15,... RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Adi_g056342 TAF15 component *(TAF15) of TFIId basal transcription... 0.02 OrthoFinder output from all 47 species
Aob_g03118 TAF15 component *(TAF15) of TFIId basal transcription... 0.04 OrthoFinder output from all 47 species
Ceric.10G036100.1 TAF15, Ceric.10G036100 component *(TAF15) of TFIId basal transcription... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.52 TAF15 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Dcu_g33405 TAF15 component *(TAF15) of TFIId basal transcription... 0.03 OrthoFinder output from all 47 species
GSVIVT01010206001 TAF15 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Gb_28670 TAF15 component TAF15 of TFIId basal transcription regulation complex 0.02 OrthoFinder output from all 47 species
MA_10434282g0010 TAF15 component TAF15 of TFIId basal transcription regulation complex 0.03 OrthoFinder output from all 47 species
Mp8g16600.1 TAF15 component TAF15 of TFIId basal transcription regulation complex 0.05 OrthoFinder output from all 47 species
Ore_g08780 TAF15 component *(TAF15) of TFIId basal transcription... 0.03 OrthoFinder output from all 47 species
Sam_g48969 No alias component *(TAF15) of TFIId basal transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e034916_P002 TAF15, Zm00001e034916 component TAF15 of TFIId basal transcription regulation complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 15 90
IPR001876 Znf_RanBP2 222 248
IPR001876 Znf_RanBP2 153 182
No external refs found!