Solyc11g040080.1.1 (YCF2.1, Solyc11g040080)


Aliases : YCF2.1, Solyc11g040080

Description : Protein Ycf2 A OS=Atropa belladonna (sp|q8s8v2|ycf2a_atrbe : 97.1)


Gene families : OG0003470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g040080.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00543p00008950 YCF2.1,... Protein Ycf2 OS=Morus indica 0.02 OrthoFinder output from all 47 species
Solyc01g017070.1.1 YCF2.1, Solyc01g017070 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc01g056460.1.1 YCF2.1, Solyc01g056460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g020100.2.1 Solyc03g020100 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc06g048990.1.1 YCF2.1, Solyc06g048990 Protein Ycf2 OS=Nicotiana tomentosiformis... 0.03 OrthoFinder output from all 47 species
Solyc07g021110.1.1 YCF2.1, Solyc07g021110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g061465.1.1 YCF2.1, Solyc09g061465 regulatory component YCF2 of AAA-ATPase motor complex 0.01 OrthoFinder output from all 47 species
Solyc10g019000.3.1 YCF2.1, Solyc10g019000 regulatory component YCF2 of AAA-ATPase motor complex 0.01 OrthoFinder output from all 47 species
Solyc11g062040.1.1 YCF2.1, Solyc11g062040 Protein Ycf2 A OS=Atropa belladonna... 0.02 OrthoFinder output from all 47 species
Solyc11g065050.1.1 YCF2.1, Solyc11g065050 Protein Ycf2 OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Solyc12g036000.1.1 YCF2.1, Solyc12g036000 Protein Ycf2 OS=Solanum tuberosum (sp|q27ry7|ycf2_soltu : 189.0) 0.04 OrthoFinder output from all 47 species
Zm00001e009619_P001 YCF2.1, Zm00001e009619 Protein Ycf2 OS=Lemna minor (sp|a9l9d9|ycf2_lemmi : 100.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!