Solyc11g064990.2.1 (HSFB4, SCZ, AT-HSFB4,...)

Aliases : HSFB4, SCZ, AT-HSFB4, Solyc11g064990

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g064990.2.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00073p00033500	HSFB4, SCZ,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
AT1G46264	HSFB4, SCZ, AT-HSFB4	heat shock transcription factor B4	0.05	OrthoFinder output from all 47 species
AT1G67970	HSFA8, AT-HSFA8	heat shock transcription factor A8	0.01	OrthoFinder output from all 47 species
Ala_g09418	ATHSFA1D, HSFA1D	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g38839	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g59731	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08806	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69372.t1	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0352.g066613	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=82-1875	0.03	OrthoFinder output from all 47 species
Cba_g78307	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.22G003800.1	HSFB4, SCZ,...	HSF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.29G078200.1	HSFB4, SCZ,...	HSF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dde_g30115	ATHSF1, HSF1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g53220.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.01	OrthoFinder output from all 47 species
LOC_Os09g28200.1	HSFB4, SCZ,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Lfl_g38313	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Mp4g12230.1	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Ore_g18363	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g27452	AT-HSFA5, HSFA5	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g09098	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g64053	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g078340.4.1	AT-HSFB2A,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Solyc06g053960.3.1	AT-HSFA6B,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Tin_g12323	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001765_P002	HSFB4, SCZ,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e009909_P001	HSFB4, SCZ,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e035680_P002	HSFB4, SCZ,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	24	113

External Links

No external refs found!

Solyc11g064990.2.1 (HSFB4, SCZ, AT-HSFB4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation