Solyc11g065210.3.1 (UBP24, Solyc11g065210)

Aliases : UBP24, Solyc11g065210

Description : deubiquitinase (UBP24)

Gene families : OG0005424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005424_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g065210.3.1

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene68603.t1	UBP24, Aspi01Gene68603	deubiquitinase *(UBP24) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene68604.t1	UBP24, Aspi01Gene68604	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os07g46660.1	UBP24, LOC_Os07g46660	deubiquitinase (UBP24)	0.04	OrthoFinder output from all 47 species
Mp3g13650.1	UBP24	deubiquitinase (UBP24)	0.03	OrthoFinder output from all 47 species
Zm00001e010918_P001	UBP24, Zm00001e010918	deubiquitinase (UBP24)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	178	531

External Links

No external refs found!