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  5. Solyc11g065390.3.1

Solyc11g065390.3.1 (Solyc11g065390)


Aliases : Solyc11g065390

Description : no hits & (original description: none)


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g065390.3.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00258400 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G05280 No alias Protein of unknown function (DUF604) 0.03 OrthoFinder output from all 47 species
AT1G07850 No alias Protein of unknown function (DUF604) 0.08 OrthoFinder output from all 47 species
AT1G33250 No alias Protein of unknown function (DUF604) 0.01 OrthoFinder output from all 47 species
AT5G12460 No alias Protein of unknown function (DUF604) 0.04 OrthoFinder output from all 47 species
Aev_g49241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G053300.1 Ceric.03G053300 not classified & original description: pacid=50572689... 0.03 OrthoFinder output from all 47 species
Ceric.21G066600.1 Ceric.21G066600 not classified & original description: pacid=50604451... 0.01 OrthoFinder output from all 47 species
Ehy_g23830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019725001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01034119001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_12418 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_31866 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g03270.1 LOC_Os03g03270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g39020.2 LOC_Os10g39020 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Lfl_g04154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_2039838g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_3705655g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_89971g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_93259g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000048 No alias not classified & original description: CDS=1-1572 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008392 No alias not classified & original description: CDS=1-1902 0.02 OrthoFinder output from all 47 species
Smo76443 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc08g081420.4.1 Solyc08g081420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012539_P003 Zm00001e012539 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e015444_P001 Zm00001e015444 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 202 454
No external refs found!