Solyc11g065750.2.1 (Solyc11g065750)

Aliases : Solyc11g065750

Description : component GID5 of ubiquitin protein ligase complex

Gene families : OG0003239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003239_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g065750.2.1
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
Adi_g108846	No alias	component *(GID5) of GID ubiquitinination complex &...	0.02	OrthoFinder output from all 47 species
Cre16.g664750	No alias	No description available	0.03	OrthoFinder output from all 47 species
Ore_g38377	No alias	component *(GID5) of GID ubiquitinination complex &...	0.02	OrthoFinder output from all 47 species
Sam_g29384	No alias	component *(GID5) of GID ubiquitinination complex &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	454	484

External Links

No external refs found!