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  5. Solyc11g068500.2.1

Solyc11g068500.2.1 (Solyc11g068500)


Aliases : Solyc11g068500

Description : Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana (sp|q9sfu0|sc24a_arath : 85.1)


Gene families : OG0003840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g068500.2.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g02268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23056 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01036116001 No alias Protein transport protein Sec24-like At3g07100... 0.04 OrthoFinder output from all 47 species
Lfl_g34066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo440407 No alias Protein transport protein Sec24-like At3g07100... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0009341 beta-galactosidase complex IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 119 371
IPR006900 Sec23/24_helical_dom 497 609
No external refs found!