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  5. Solyc11g069240.2.1

Solyc11g069240.2.1 (Solyc11g069240)


Aliases : Solyc11g069240

Description : C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g069240.2.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT2G02070 IDD5, AtIDD5 indeterminate(ID)-domain 5 0.04 OrthoFinder output from all 47 species
AT3G50700 IDD2, AtIDD2 indeterminate(ID)-domain 2 0.02 OrthoFinder output from all 47 species
Adi_g028548 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g069013 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g17401 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21463.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34058.t1 IDD16, AtIDD16,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g28879 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g17431 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g18226 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01003119001 AtIDD12, IDD12 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01010961001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01031112001 IDD2, AtIDD2 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os01g09850.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os01g51590.1 LOC_Os01g51590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g70870.1 IDD2, AtIDD2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g13400.1 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os08g36390.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g27650.2 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_26324g0010 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g07810 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g04600 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g28092 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016076 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc06g072360.3.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc07g053570.4.1 MGP, Solyc07g053570 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g074780.3.1 NUC, Solyc09g074780 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g18118 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g26495 NUC C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g29144 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010628_P002 MGP, Zm00001e010628 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e016559_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e026143_P001 MGP, Zm00001e026143 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 32 54
No external refs found!